cosmo

Front and backend for Markov-Chain Monte Carlo inversion of cosmogenic nuclide concentrations
git clone git://src.adamsgaard.dk/cosmo
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commit 327d29df9476eb52b03f9c9b12269ab2e5316956
parent 2d801ff619d5e873f2dcf9a1eb559ddc606d8445
Author: Anders Damsgaard <anders.damsgaard@geo.au.dk>
Date:   Tue, 29 Sep 2015 14:04:18 +0200

update status text, fix second inversion call

Diffstat:
Mmatlab/m_pakke2014maj11/MetHasLongstep4.m | 4+---
Mmatlab/mcmc_inversion.m | 3++-
2 files changed, 3 insertions(+), 4 deletions(-)

diff --git a/matlab/m_pakke2014maj11/MetHasLongstep4.m b/matlab/m_pakke2014maj11/MetHasLongstep4.m @@ -110,9 +110,7 @@ for it=1:N_run %%% INSERTED BY ANDERS %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% fid = fopen(statusfile, 'w'); - statusinfo = strcat(... - 'Elapsed: ', num2str(datestr(ElapsedTime,13)), ... - ', Remaining: ', num2str(datestr(RemainingTime,13))); + statusinfo = strcat(num2str(datestr(RemainingTime,13), ' remaining')); fprintf(fid, statusinfo); fclose(fid); %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% diff --git a/matlab/mcmc_inversion.m b/matlab/mcmc_inversion.m @@ -236,7 +236,8 @@ for iwalk=1:fixed_stuff.Nwalkers seed = fixed_stuff.WalkerSeeds(iwalk); isBurnIn=0; %<<<<<<<<<<<<<<<<<< ------------------- must be changed when Sampling [S.ms,S.accepts,S.Qs,S.Qds,S.lump_MetHas]=MetHasLongstep4(... - mStartSampling,seed,isBurnIn,fixed_stuff); + mStartSampling,seed,isBurnIn,fixed_stuff, ... + statusfile); %%%% ADDED BY ANDERS %<<<<< ... End Sampling the posterior S.fs = fixed_stuff; S.m_start = m_starts(:,iwalk);