commit dc46674d016883f15b65d5d0150429d1b142eebe
parent f0c5149085e991fa6b9404c0e783b2560abde557
Author: Anders Damsgaard <anders@adamsgaard.dk>
Date: Fri, 7 Feb 2020 11:36:39 +0100
Clean up and remove examples
Diffstat:
15 files changed, 0 insertions(+), 319 deletions(-)
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
@@ -1,12 +0,0 @@
-build-alpine:
- stage: build
- image: alpine:edge
- before_script:
- - apk --no-cache add build-base gnuplot valgrind
- script:
- - make -C examples
- - make memtest
- - make test
- artifacts:
- paths:
- - examples/1d_fd_simple_shear.png
diff --git a/examples/1d_fd_simple_shear.gp b/examples/1d_fd_simple_shear.gp
@@ -1,18 +0,0 @@
-#!/usr/bin/env gnuplot
-
-set terminal pngcairo color size 18.6 cm, 17.6 cm
-set output "1d_fd_simple_shear.png"
-set xlabel "Normalized horizontal velocity, v_x [-]"
-set ylabel "Vertical position, z [m]" offset 2
-
-set yrange [0.0:0.73]
-set xrange [-0.1:1.05]
-
-set key bottom right #samplen 0.9
-
-plot "1d_fd_simple_shear_P10kPa.txt" u 2:1 w l lw 2 lc "#ee2430" title "P_{wall} = 10 kPa", \
- "1d_fd_simple_shear_P20kPa.txt" u 2:1 w l lw 2 lc "#53bf3a" title "P_{wall} = 20 kPa", \
- "1d_fd_simple_shear_P40kPa.txt" u 2:1 w l lw 2 lc "#2f54ad" title "P_{wall} = 40 kPa", \
- "1d_fd_simple_shear_P60kPa.txt" u 2:1 w l lw 2 lc "#b047aa" title "P_{wall} = 60 kPa", \
- "1d_fd_simple_shear_P80kPa.txt" u 2:1 w l lw 2 lc "#6ccfd9" title "P_{wall} = 80 kPa", \
- "1d_fd_simple_shear_P120kPa.txt" u 2:1 w l lw 2 lc "#231f20" title "P_{wall} = 120 kPa"
diff --git a/examples/1d_fd_simple_shear.png b/examples/1d_fd_simple_shear.png
Binary files differ.
diff --git a/examples/1d_fd_simple_shear_fluid.gp b/examples/1d_fd_simple_shear_fluid.gp
@@ -1,31 +0,0 @@
-#!/usr/bin/env gnuplot
-
-# specify input file with:
-# gnuplot -e "filename='file.txt'" 1d_fd_simple_shear_fluid.gp
-
-set terminal pngcairo color size 40 cm, 12 cm
-set multiplot layout 1,3
-# set multiplot layout 1,4
-
-set key bottom right #samplen 0.9
-
-set xlabel "Water pressure, p_f [Pa]"
-set ylabel "Vertical position, z [m]" offset 2
-set xrange [p_min:p_max]
-plot filename u 4:1 w l lw 2 lc "blue" t ""
-
-set xlabel "Effective normal stress [Pa]"
-set ylabel ""
-set xrange [0:300e3]
-plot filename u 3:1 w l lw 2 lc "black" t ""
-
-# set xlabel "Friction, mu [-]"
-# set xrange [-0.05:1.5]
-# plot filename u 5:1 w l lw 2 lc "gray" t ""
-
-set xlabel "Horizontal velocity, v_x [m/s]"
-set ylabel ""
-set xrange [0.0:0.025]
-plot filename u 2:1 w l lw 2 lc "red" t ""
-
-unset multiplot
diff --git a/examples/1d_fd_simple_shear_rheology.gp b/examples/1d_fd_simple_shear_rheology.gp
@@ -1,18 +0,0 @@
-#!/usr/bin/env gnuplot
-
-set terminal pngcairo color size 18.6 cm, 17.6 cm
-set output "1d_fd_simple_shear_rheology.png"
-set xlabel "Applied friction, mu = tau/N [-]"
-set ylabel "Shear velocity, v [m/s]" offset 2
-
-set xrange [0.0:0.7]
-set yrange [0.0:0.01]
-set key top left #samplen 0.9
-
-plot "1d_fd_simple_shear_rheology_b0.01.txt" u 1:2 w l lw 2 t "b = 0.01", \
- "1d_fd_simple_shear_rheology_b0.10.txt" u 1:2 w l lw 2 t "b = 0.1", \
- "1d_fd_simple_shear_rheology_b0.20.txt" u 1:2 w l lw 2 t "b = 0.2", \
- "1d_fd_simple_shear_rheology_b0.40.txt" u 1:2 w l lw 2 t "b = 0.4", \
- "1d_fd_simple_shear_rheology_b0.60.txt" u 1:2 w l lw 2 t "b = 0.6", \
- "1d_fd_simple_shear_rheology_b0.80.txt" u 1:2 w l lw 2 t "b = 0.8", \
- "1d_fd_simple_shear_rheology_b1.00.txt" u 1:2 w l lw 2 t "b = 1.0"
diff --git a/examples/1d_fd_simple_shear_rheology.png b/examples/1d_fd_simple_shear_rheology.png
Binary files differ.
diff --git a/examples/1d_fd_simple_shear_rheology_iverson.gp b/examples/1d_fd_simple_shear_rheology_iverson.gp
@@ -1,26 +0,0 @@
-#!/usr/bin/env gnuplot
-
-reset
-
-## resemble Iverson 2010 plot:
-
-#set terminal pngcairo color size 18.6 cm, 11.0 cm
-set terminal pngcairo size 18.6 cm, 11.0 cm
-set output "1d_fd_simple_shear_rheology_iverson.png"
-
-set xlabel "Shear strain rate [a^{-1}]"
-set ylabel "Shear friction [-]" offset 2
-
-set xrange [1e1:1e6] # m/a
-set yrange [0.0:0.8]
-set key bottom right #samplen 0.9
-
-set logscale x
-
-load 'BlueSeq.plt'
-
-plot "1d_fd_simple_shear_rheology_b0.94_iverson.txt" u ($2*3600*24*365):1 w l lc '#666666' lw 2 dashtype '-' t "glass beads, b = 0.94", \
- "1d_fd_simple_shear_rheology_b0.40_iverson.txt" u ($2*3600*24*365):1 w l ls 6 lw 2 t "b = 0.40", \
- "1d_fd_simple_shear_rheology_b0.20_iverson.txt" u ($2*3600*24*365):1 w l ls 5 lw 2 t "b = 0.20", \
- "1d_fd_simple_shear_rheology_b0.10_iverson.txt" u ($2*3600*24*365):1 w l ls 3 lw 2 t "b = 0.10", \
- "1d_fd_simple_shear_rheology_b0.01_iverson.txt" u ($2*3600*24*365):1 w l ls 1 lw 2 t "b = 0.01"
diff --git a/examples/1d_fd_simple_shear_rheology_iverson.png b/examples/1d_fd_simple_shear_rheology_iverson.png
Binary files differ.
diff --git a/examples/1d_fd_simple_shear_rheology_kamb.gp b/examples/1d_fd_simple_shear_rheology_kamb.gp
@@ -1,21 +0,0 @@
-#!/usr/bin/env gnuplot
-reset
-
-## resemble Kamb 1991 plot:
-
-set terminal pngcairo color size 18.6 cm, 17.6 cm
-set output "1d_fd_simple_shear_rheology_kamb.png"
-set xlabel "Shear stress [bar]"
-set ylabel "Shear displacment rate [m/day]" offset 2
-
-set xrange [0.0:0.028]
-set yrange [0.0:2.5]
-set key top left #samplen 0.9
-
-load 'BlueSeq.plt'
-
-plot "1d_fd_simple_shear_rheology_b0.94_kamb.txt" u ($1*1700/100000):($2*3600*24) w l lc '#666666' lw 2 dashtype '-' t "b = 0.94", \
- "1d_fd_simple_shear_rheology_b0.40_kamb.txt" u ($1*1700/100000):($2*3600*24) w l ls 6 lw 2 t "b = 0.40", \
- "1d_fd_simple_shear_rheology_b0.20_kamb.txt" u ($1*1700/100000):($2*3600*24) w l ls 5 lw 2 t "b = 0.20", \
- "1d_fd_simple_shear_rheology_b0.10_kamb.txt" u ($1*1700/100000):($2*3600*24) w l ls 3 lw 2 t "b = 0.10", \
- "1d_fd_simple_shear_rheology_b0.01_kamb.txt" u ($1*1700/100000):($2*3600*24) w l ls 1 lw 2 t "b = 0.01"
diff --git a/examples/1d_fd_simple_shear_rheology_kamb.png b/examples/1d_fd_simple_shear_rheology_kamb.png
Binary files differ.
diff --git a/examples/1d_fd_simple_shear_rheology_tulaczyk.gp b/examples/1d_fd_simple_shear_rheology_tulaczyk.gp
@@ -1,25 +0,0 @@
-#!/usr/bin/env gnuplot
-
-## resemble Tulaczyk 2006 plot:
-
-set terminal pngcairo color size 18.6 cm, 17.6 cm
-set output "1d_fd_simple_shear_rheology_tulaczyk.png"
-set xlabel "Normalized shear stress [-]"
-set ylabel "Normalized shear strain rate [-]" offset 2
-
-set xrange [0.1:10.0]
-set yrange [1.0:1000.0]
-set key top left #samplen 0.9
-
-set logscale xy
-
-load 'BlueSeq.plt'
-
-# divide friction by threshold friction value (mu_s)
-# divide shear velocity by 1 m/h
-
-plot "1d_fd_simple_shear_rheology_b0.94_tulaczyk.txt" u ($1/0.502):($2/3.4e-9) w l lc '#666666' lw 2 dashtype '-' t "b = 0.94", \
- "1d_fd_simple_shear_rheology_b0.40_tulaczyk.txt" u ($1/0.502):($2/8.6e-9) w l ls 6 lw 2 t "b = 0.40", \
- "1d_fd_simple_shear_rheology_b0.20_tulaczyk.txt" u ($1/0.502):($2/1.7e-8) w l ls 5 lw 2 t "b = 0.20", \
- "1d_fd_simple_shear_rheology_b0.10_tulaczyk.txt" u ($1/0.502):($2/3.5e-8) w l ls 3 lw 2 t "b = 0.10", \
- "1d_fd_simple_shear_rheology_b0.01_tulaczyk.txt" u ($1/0.502):($2/3.5e-7) w l ls 1 lw 2 t "b = 0.01"
diff --git a/examples/1d_fd_simple_shear_rheology_tulaczyk.png b/examples/1d_fd_simple_shear_rheology_tulaczyk.png
Binary files differ.
diff --git a/examples/BlueSeq.plt b/examples/BlueSeq.plt
@@ -1,26 +0,0 @@
-# line styles for ColorBrewer Blues
-# for use with sequential data
-# provides 8 blue colors of increasing saturation
-# compatible with gnuplot >=4.2
-# derived from Anna Schneider
-
-# line styles
-
-set style line 1 lc rgb '#084594' # dark blue
-set style line 2 lc rgb '#2171B5' #
-set style line 3 lc rgb '#4292C6' # medium blue
-set style line 4 lc rgb '#6BAED6' #
-set style line 5 lc rgb '#9ECAE1' # light blue
-set style line 6 lc rgb '#C6DBEF' #
-set style line 7 lc rgb '#DEEBF7' #
-set style line 8 lc rgb '#F7FBFF' # very light blue
-
-# palette
-set palette defined ( 0 '#084594',\
- 1 '#2171B5',\
- 2 '#4292C6',\
- 3 '#6BAED6',\
- 4 '#9ECAE1',\
- 5 '#C6DBEF',\
- 6 '#DEEBF7',\
- 7 '#F7FBFF')
diff --git a/examples/Makefile b/examples/Makefile
@@ -1,115 +0,0 @@
-BIN = ../1d_fd_simple_shear
-
-plots: 1d_fd_simple_shear.png \
- 1d_fd_simple_shear_rheology.png \
- 1d_fd_simple_shear_rheology_kamb.png \
- 1d_fd_simple_shear_rheology_iverson.png \
- 1d_fd_simple_shear_rheology_tulaczyk.png \
- diurnal.timeseries.pdf
-
-diurnal.mp4: diurnal.output00000.txt.png
- ffmpeg -i diurnal.output%05d.txt.png -y diurnal.mp4
-
-diurnal.output00000.txt.png: 1d_fd_simple_shear_fluid.gp diurnal.output00000.txt
- /bin/sh -c '\
- for f in diurnal.output*.txt; do \
- gnuplot -e "filename=\"$$f\"; p_min=\"0\"; p_max=\"100e3\"" \
- 1d_fd_simple_shear_fluid.gp > $$f.png; \
- done'
-
-diurnal.output00000.txt: $(BIN)
- /bin/sh -c '\
- ./$(BIN) --length 8.0 --normal-stress 150e3 \
- --fluid --fluid-permeability 2e-17 \
- --fluid-pressure-top 50e3 --fluid-pressure-ampl 100e3 \
- --fluid-pressure-freq $$( echo "1.0/(3600*24)" | bc -l ) \
- --file-interval $$( echo "60*10" | bc -l ) \
- --time-end $$( echo "3600*24*7" | bc -l ) diurnal'
-
-diurnal.timeseries.txt: diurnal.output00000.txt
- /bin/sh -c '\
- for f in diurnal.output*.txt; do \
- tail -n 1 "$$f" | cut -f2- >> $@; \
- done'
-
-diurnal.timeseries.pdf: diurnal.timeseries.gp diurnal.timeseries.txt
- gnuplot diurnal.timeseries.gp > $@
-
-diurnal.gif: diurnal.mp4
- convert diurnal.output*.txt.png \
- -delay 1 -loop 0 -fuzz 10% -layers Optimize $@
-
-1d_fd_simple_shear.png: $(BIN) 1d_fd_simple_shear.gp
- /bin/sh -c '\
- for P in 10 20 40 60 80 120; do \
- ./$(BIN) --stress-ratio 0.44 -o 0.03 -L 0.64 -P $${P}e3 -N \
- > 1d_fd_simple_shear_P$${P}kPa.txt; \
- done'
- gnuplot 1d_fd_simple_shear.gp > $@
-
-1d_fd_simple_shear_rheology.png: $(BIN) 1d_fd_simple_shear_rheology.gp
- /bin/sh -c '\
- for b in $$(printf "0.01\n0.10\n"; jot 5 0.20 1.00); do \
- out="1d_fd_simple_shear_rheology_b$${b}.txt"; \
- rm -f "$$out"; \
- for t in $$(jot 80 0.01 0.80); do \
- printf "$$t\t" >> "$$out"; \
- ./$(BIN) -P 20e3 --stress-ratio $$t -b $$b | \
- tail -n 1 | cut -f2 >> "$$out"; \
- done; done'
- gnuplot 1d_fd_simple_shear_rheology.gp > $@
-
-# 1 bar is equal to 100 kPa
-1d_fd_simple_shear_rheology_kamb.png: $(BIN) 1d_fd_simple_shear_rheology_kamb.gp Makefile
- /bin/sh -c '\
- for b in 0.01 0.10 0.20 0.40 0.94; do \
- out="1d_fd_simple_shear_rheology_b$${b}_kamb.txt"; \
- rm -f "$$out"; \
- for t in $$(jot 200 0.01 2.0); do \
- printf "$$t\t" >> "$$out"; \
- ./$(BIN) -f 0.443 -C 1.0e3 -P 1.7e3 --stress-ratio $$t -b $$b | \
- tail -n 1 | cut -f2 >> "$$out"; \
- done; done'
- gnuplot 1d_fd_simple_shear_rheology_kamb.gp > $@
-
-# shear-strain rate from 10^1 to 10^6 m/a
-# friction around 0.55
-1d_fd_simple_shear_rheology_iverson.png: $(BIN) 1d_fd_simple_shear_rheology_iverson.gp
- /bin/sh -c '\
- for b in $$(printf "0.01\n0.10\n"; jot 8 0.20 0.90) 0.94; do \
- out="1d_fd_simple_shear_rheology_b$${b}_iverson.txt"; \
- rm -f "$$out"; \
- for t in $$(jot 50 0.0001 1.0); do \
- printf "$$t\t" >> "$$out"; \
- ./$(BIN) -f 0.55 -P 100e3 -L 1.0 --stress-ratio $$t -b $$b | \
- tail -n 1 | cut -f2 >> "$$out"; \
- done; done'
- gnuplot 1d_fd_simple_shear_rheology_iverson.gp > $@
-
-# shear velocity rate from 0.1 m/h to 100 m/h
-1d_fd_simple_shear_rheology_tulaczyk.png: $(BIN) 1d_fd_simple_shear_rheology_tulaczyk.gp
- /bin/sh -c '\
- for b in $$(printf "0.01\n0.10\n"; jot 8 0.20 1.0) 0.94; do \
- out="1d_fd_simple_shear_rheology_b$${b}_tulaczyk.txt"; \
- rm -f "$$out"; \
- for t in $$(jot 50 0.1000 0.9); do \
- printf "$$t\t" >> "$$out"; \
- ./$(BIN) -f 0.5 -P 10e3 --stress-ratio $$t -b $$b | \
- tail -n 1 | cut -f2 >> "$$out"; \
- done; done'
- gnuplot 1d_fd_simple_shear_rheology_tulaczyk.gp > $@
-
-$(BIN):
- make -C ..
-
-clean:
- rm -f *.txt
- rm -f *.png
- rm -f *.gif
- rm -f *.mp4
- rm -f *.pdf
- rm -f *.o
- rm -f 1d_fd_simple_shear.png
- rm -f 1d_fd_simple_shear_rheology*.png
-
-.PHONY: plots clean
diff --git a/examples/diurnal.timeseries.gp b/examples/diurnal.timeseries.gp
@@ -1,27 +0,0 @@
-#!/usr/bin/env gnuplot
-reset
-
-#set terminal pdfcairo color size 10.0 cm, 5.0 cm
-set terminal pdfcairo color size 10.0 cm, 8.0 cm
-
-# set xrange [0.0:0.7]
-# set yrange [0.0:0.01]
-# set key top left #samplen 0.9
-
-set multiplot layout 2,1
-
-unset xlabel
-unset xtics
-set yrange [0:210]
-set ylabel "Stress [kPa]" offset 2
-plot \
-"diurnal.timeseries.txt" u ($0/1008*7):($2/1000) w l lw 2 lc "black" t "effective normal stress", \
-"" u ($0/1008*7):($3/1000) w l lw 2 lc "blue" dt "-" t "water pressure"
-
-set xtics
-unset yrange
-set xlabel "Time, t [d]"
-set ylabel "Shear velocity, v [km/d]" offset 2
-plot "" u ($0/1008*7):($1*60*60*24/1000) w l lw 2 lc "red" t ""
-
-unset multiplot
