petsc-git-PKGBUILD

commit d8aa242b76075f92d225789a712db168e3484888
parent 3923f5328d1e9c3782719b8b5de2b301dbe9d2c9
Author: eDgar <eDgar_|at|_openmail.cc>
Date:   Thu, 23 Sep 2021 11:11:13 -0500

reinstate blaslapack_download.patch; arrange LIBX11_SO; fix BLAS if

Diffstat:
M
PKGBUILD
 | 
12
+++++++++---
A
blaslapack_download.patch
 | 
11
+++++++++++
M
test_optdepends.sh
 | 
31
+++++++++++++++----------------

3 files changed, 35 insertions(+), 19 deletions(-)
diff --git a/PKGBUILD b/PKGBUILD
@@ -5,7 +5,7 @@
 
 _base=petsc
 pkgname=("${_base}"-git "${_base}"-doc)
-pkgver=3.15.4.33.g0bac13e0fe9
+pkgver=3.15.4.37.g17c486c0fcd
 pkgrel=1
 _mainver="${pkgver:0:6}"
 pkgdesc="Portable, extensible toolkit for scientific computation"
@@ -19,10 +19,12 @@ makedepends=('gcc' 'gcc-fortran' 'cmake' 'sowing' "pkgconf"
              'git' 'cython' 'chrpath' "hypre=2.18.2")
 source=(git+${url}.git#branch=release
         https://ftp.mcs.anl.gov/pub/petsc/release-snapshots/petsc-with-docs-"${_mainver}".tar.gz
-        test_optdepends.sh)
+        test_optdepends.sh
+        blaslapack_download.patch)
 sha512sums=('SKIP'
             'b6a1d48aab1c2639a4c1cbd8b313ace253f1c36eedaa3de3508ffbd6060e1def99e2f516ed9bb509307f614b41791d09342e2c2280c0b2c25dda1092b0e569d2'
-            '26145ebce4c3c2a418488e1412579ea56744e9da07f0f6ebc9e457a14ca8679d207135b36a351e5e49efa5083ea6506516f6bfb2aef978d3986fcde7ebe8d4c0')
+            '3b3b6de71e65e8b9806e16f9a2c839e6022ce0d6860606ec38604377b946e843c7227385c46d1f13195266575dc381b6a391cba33fc754ff461fed650ac1d332'
+           'af899ea1d06bf6d4cee1c1fe86902ba2772d1001caf00e89363c6217fed9dd837588ee6f7f827ca8b8fd2a01316fbcd73d98874e28d452af71b9598127b6f179')
 
 _config=linux-c-opt
 _install_dir="/usr"
@@ -87,6 +89,10 @@ export OMPI_MCA_opal_cuda_support=0
 unset PETSC_DIR
 export PETSC_ARCH=${_config}
 
+prepare () {
+  patch -p1 -i "${srcdir}"/blaslapack_download.patch
+}
+
 pkgver() {
   cd "${srcdir}"/"${_base}"
   git describe --tags --match '*.*' | tr '-' '.' | sed 's-^v--'
diff --git a/blaslapack_download.patch b/blaslapack_download.patch
@@ -0,0 +1,11 @@
+--- b/petsc/config/BuildSystem/config/packages/BlasLapack.py	2021-09-17 23:26:42.115594175 -0500
++++ b/petsc/config/BuildSystem/config/packages/BlasLapack.py	2021-09-17 22:53:07.122154127 -0500
+@@ -187,7 +187,7 @@
+         yield ('OpenBLAS with full path', None, os.path.join(self.openblas.libDir,'libopenblas.a'),self.openblas.known64,self.openblas.usesopenmp)
+       else:
+         yield ('OpenBLAS', None, self.openblas.lib,self.openblas.known64,self.openblas.usesopenmp)
+-      raise RuntimeError('--download-openblas libraries cannot be used')
++      ###raise RuntimeError('--download-openblas libraries cannot be used')
+     if 'with-blas-lib' in self.argDB and not 'with-lapack-lib' in self.argDB:
+       raise RuntimeError('If you use the --with-blas-lib=<lib> you must also use --with-lapack-lib=<lib> option')
+     if not 'with-blas-lib' in self.argDB and 'with-lapack-lib' in self.argDB:
diff --git a/test_optdepends.sh b/test_optdepends.sh
@@ -11,9 +11,11 @@ find_so () {
 # Find directory where a pkg-config file is
 #   example: find_pc glut
 find_pc () {
-    $(dirname "$(pkgconf --path "$1")")
+    dirname "$(pkgconf --path "$1")"
 }
 
+ONLY_INC="--keep-system-cflags --cflags-only-I";
+
 type mpicc >/dev/null && \
     CONFOPTS="${CONFOPTS} --with-cc=mpicc"
 type mpicxx >/dev/null && \
@@ -132,16 +134,13 @@ fi
 BLAS_SO="$(find_so libblas.so)"
 OPENBLAS_SO="$(find_so libopenblas.so)"
 LAPACK_SO="$(find_so liblapack.so)"
-if [ -f "${BLAS_SO}" && \-f "${OPENBLAS_SO}" && \
-         -f "${LAPACK_SO}" ]; then
-    OPENBLAS_INC="$(pkgconf -keep-system-cflags -cflags openblas)"
-	CONFOPTS="${CONFOPTS} --with-openblas=1"
+if [ -f "${BLAS_SO}" ] && [ -f "${OPENBLAS_SO}" ] \
+       && [ -f "${LAPACK_SO}" ]; then
+    CONFOPTS="${CONFOPTS} --with-openblas=1"
+    OPENBLAS_INC="$(pkgconf ${ONLY_INC} openblas)"
+    OPENBLAS_INC="${OPENBLAS_INC//-I/}"
 	CONFOPTS="${CONFOPTS} --with-openblas-lib=${OPENBLAS_SO}"
 	CONFOPTS="${CONFOPTS} --with-openblas-include=${OPENBLAS_INC}"
-    # With help from Satish Balay
-    # @ 3.15.4.33.g0bac13e0fe9 2021-09-21
-    #  nm -AoD /usr/lib64/libopenblas.so | grep dgetrs_
-    CONFOPTS="${CONFOPTS} --with-blaslapack-lib=${LAPACK_SO},${BLAS_SO}"
 fi
 
 # OpenCL: GPU computing
@@ -239,15 +238,15 @@ if [ -f "${OPENCL_SO}" ]; then
 fi
 
 # X: to enable ksp_xmonitor
-LIBX11="$(find_so libX11.so)"
-LIBX11_DIR="$(dirname ${LIBX11})"
-if [ -f "${LIBX11}" ]; then
-    LIBX11_INC="--keep-system-cflags --cflags-only-I";
-    LIBX11_INC="$(pkgconf ${LIBX11_INC} x11)";
+LIBX11_SO="$(find_so libX11.so)"
+LIBX11_DIR="$(dirname ${LIBX11_SO})"
+if [ -f "${LIBX11_SO}" ]; then
+    LIBX11_INC="$(pkgconf ${ONLY_INC} x11)";
+    LIBX11_INC="${LIBX11_INC//-I/}";
 	CONFOPTS="${CONFOPTS} --with-x-lib=[${LIBX11_DIR}/";
     # As per X11.pc, it seems that xcb.so is needed
-    CONFOPTS="${CONFOPTS}libX11-xcb.so,${LIBX11}]"
-    CONFOPTS="${CONFOPTS} --with-x-include=${LIBX11_INC//-I/}"
+    CONFOPTS="${CONFOPTS}libX11-xcb.so,${LIBX11_SO}]"
+    CONFOPTS="${CONFOPTS} --with-x-include=${LIBX11_INC}"
 fi
 
 # ZLIB